Information report for AT1G01160
Gene Details
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Functional Descriptions
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0005634 — located in — nucleus
- GO:0005515 — enables — protein binding
- GO:0048366 — acts upstream of or within — leaf development
- GO:0045787 — acts upstream of or within — positive regulation of cell cycle
- GO:0003713 — enables — transcription coactivator activity
- GO:0005634 — colocalizes with — nucleus
- an3 gif2 — Strong disorganization of quiescent center of root meristem.
- an3 gif2 gif3 — Strong disorganization of quiescent center of root meristem.
Functional Keywords
- cauline leaf , inflorescence meristem , seed , carpel , petal , stem , pollen , guard cell
Literature and News
- Unregulated Sphingolipid Biosynthesis in Gene-Edited Arabidopsis ORM Mutants Results in Nonviable Seeds with Strongly Reduced Oil Content. DOI: 10.1105/tpc.20.00015 ; PMID: 32527862
- NA DOI: NA ; PMID: 33822991
- Mechanism of sphingolipid homeostasis revealed by structural analysis of Arabidopsis SPT-ORM1 complex. DOI: 10.1126/sciadv.adg0728 ; PMID: 36989369
- Unexpected protein families including cell defense components feature in the N-myristoylome of a higher eukaryote. DOI: 10.1074/jbc.M307321200 ; PMID: 12912986
- Linking genes of unknown function with abiotic stress responses by high-throughput phenotype screening. DOI: 10.1111/ppl.12013 ; PMID: 23517122
- Phylogeny and domain evolution in the APETALA2-like gene family. DOI: 10.1093/molbev/msj014 ; PMID: 16151182
- Arabidopsis ESK1 encodes a novel regulator of freezing tolerance. DOI: 10.1111/j.1365-313X.2006.02994.x ; PMID: 17316173
- Genome-wide analysis of Arabidopsis responsive transcriptome to nitrogen limitation and its regulation by the ubiquitin ligase gene NLA. DOI: 10.1007/s11103-007-9241-0 ; PMID: 17885809
- Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding. DOI: 10.1186/1471-2164-9-57 ; PMID: 18230180
- Genome-wide analysis of the ERF gene family in Arabidopsis and rice. DOI: 10.1104/pp.105.073783 ; PMID: 16407444
- The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity. DOI: 10.1093/molbev/msg088 ; PMID: 12679534
- The Arabidopsis basic/helix-loop-helix transcription factor family. DOI: 10.1105/tpc.013839 ; PMID: 12897250
Gene Resources
- UniProt: F4HQJ3
- EMBL: CP002684
- AlphaFoldDB: F4HQJ3
- EnsemblPlants: AT1G01160.2
- Gramene: AT1G01160.2
- ExpressionAtlas: AT1G01160
- InterPro: IPR007726
- SWISS-MODEL: F4HQJ3
Homologs
- Lotus japonicus Lj5g0004761
- Oryza sativa MKB3
Sequences
cDNA Sequence
- >AT1G01160.2
GAGAGAGAGAGACAGAGGCATTTTTGGTCATAAAATCCACACAGAGGTGGTTCGACATCCAGGTGAATCCAAGTAATAAATTGCAGGATTCTCTCTCTATAATATATATAGATATAGCTTGCAATCATTTCCTGCGTTTGGATCGGTCTGGGTTTTGTCGAGGGTTTTTTGGGGAAGACGAAATTAGGGTTTAGTTGGGGCAAAGTAAGTAGTAAAGAAGAAGAAGATGCAGCAGCAGCAGTCTCCGCAAATGTTTCCGATGGTTCCGTCGATTCCCCCTGCTAACAACATCACTACCGAACAGATCCAAAAGATGCTTGGTGGGTCAGGAAACTTTGAATCCGGTTTTCAAGAATGGACATTGAAGTTAGATGCTTGCTTGATGTTGTTGTTTTGTACTTTCTCTTGGCTTGATTACCTTGATGAGAACAAGAAGCTGATTATGGCCATCATGGAAAACCAGAATCTCGGTAAACTTGCTGAGTGCGCCCAGTACCAAGCTCTTCTCCAGAAGAACTTGATGTATCTTGCTGCAATTGCTGATGCTCAACCCCCACCACCTACGCCAGGACCTTCACCATCTACAGCTGTCGCTGCCCAGATGGCAACACCGCATTCTGGGATGCAACCACCTAGCTACTTCATGCAACACCCACAAGCATCCCCTGCAGGGATTTTCGCTCCAAGGGGTCCTTTACAGTTTGGTAGCCCACTCCAGTTTCAGGATCCGCAACAGCAGCAGCAGATACATCAGCAAGCTATGCAAGGACACATGGGGATTAGACCAATGGGTATGACCAACAACGGGATGCAGCATGCGATGCAACAACCAGAAACCGGTCTTGGAGGAAACGTGGGGCTTAGAGGAGGAAAGCAAGATGGAGCAGATGGACAAGGAAAAGATGATGGCAAGTGAAAAGGATCCAAAGAAGCTTTGTTTTGTTGATATTTAGGACTTGTGAGTCTCGTAAGGGCTTTTTGCAATAGCTTGTTTGAGTTTTTTAACAGAAGATAGACTGTGGAGTAGTTCCGCAAACCGTGTTGTAATGTATTGTTATTTAGTACAAGCTCGGATTTAGAAAACATCGTCATCGTTCATCTTATTCTGAAAATCAAAGCATTGAACTTA - >AT1G01160.1
GAGAGAGAGAGACAGAGGCATTTTTGGTCATAAAATCCACACAGAGGTGGTTCGACATCCAGGTGAATCCAAGTAATAAATTGCAGGATTCTCTCTCTATAATATATATAGATATAGCTTGCAATCATTTCCTGCGTTTGGATCGGTCTGGGTTTTGTCGAGGGTTTTTTGGGGAAGACGAAATTAGGGTTTAGTTGGGGCAAAGTAAGTAGTAAAGAAGAAGAAGATGCAGCAGCAGCAGTCTCCGCAAATGTTTCCGATGGTTCCGTCGATTCCCCCTGCTAACAACATCACTACCGAACAGATCCAAAAGATGCTTGGTGGGTCAGGAAACTTTGAATCCGGTTTTCAAGAATGGACATTGAAGTTAGATGCTTGCTTGATGTTGTTGTTTTGTACTTTCTCTTGGCTTGATTACCTTGATGAGAACAAGAAGCTGATTATGGCCATCATGGAAAACCAGAATCTCGGTAAACTTGCTGAGTGCGCCCAGTACCAAGCTCTTCTCCAGAAGAACTTGATGTATCTTGCTGCAATTGCTGATGCTCAACCCCCACCACCTACGCCAGGACCTTCACCATCTACAGCTGTCGCTGCCCAGATGGCAACACCGCATTCTGGGATGCAACCACCTAGCTACTTCATGCAACACCCACAAGCATCCCCTGCAGGGATTTTCGCTCCAAGGGGTCCTTTACAGTTTGGTAGCCCACTCCAGTTTCAGGATCCGCAACAGCAGCAGCAGATACATCAGCAAGCTATGCAAGGACACATGGGGATTAGACCAATGGGTATGACCAACAACGGGATGCAGCATGCGATGCAACAACCAGAAACCGGTCTTGGAGGAAACGTGGGGCTTAGAGGAGGAAAGCAAGATGGAGCAGATGGACAAGGAAAAGATGATGGCAAGTGAAAAGGATCCAAAGAAGCTTTGTTTTGTTGATATTTAGGACTTGTGAGTCTCGTAAGGGCTTTTTGCAATAGCTTGTTTGAGTTTTTTAACAGAAGATAGACTGTGGAGTAGTTCCGCAAACCGTGTTGTAATGTATTGTTATTTAGTACAAGCTCGGATTTAGAAAACATCGTCATCGTTCATCTTATTCTGAAAATCAAAGCATTGAACTTA
CDS Sequence
- >AT1G01160.2
ATGCAGCAGCAGCAGTCTCCGCAAATGTTTCCGATGGTTCCGTCGATTCCCCCTGCTAACAACATCACTACCGAACAGATCCAAAAGATGCTTGGTGGGTCAGGAAACTTTGAATCCGGTTTTCAAGAATGGACATTGAAGTTAGATGCTTGCTTGATGTTGTTGTTTTGTACTTTCTCTTGGCTTGATTACCTTGATGAGAACAAGAAGCTGATTATGGCCATCATGGAAAACCAGAATCTCGGTAAACTTGCTGAGTGCGCCCAGTACCAAGCTCTTCTCCAGAAGAACTTGATGTATCTTGCTGCAATTGCTGATGCTCAACCCCCACCACCTACGCCAGGACCTTCACCATCTACAGCTGTCGCTGCCCAGATGGCAACACCGCATTCTGGGATGCAACCACCTAGCTACTTCATGCAACACCCACAAGCATCCCCTGCAGGGATTTTCGCTCCAAGGGGTCCTTTACAGTTTGGTAGCCCACTCCAGTTTCAGGATCCGCAACAGCAGCAGCAGATACATCAGCAAGCTATGCAAGGACACATGGGGATTAGACCAATGGGTATGACCAACAACGGGATGCAGCATGCGATGCAACAACCAGAAACCGGTCTTGGAGGAAACGTGGGGCTTAGAGGAGGAAAGCAAGATGGAGCAGATGGACAAGGAAAAGATGATGGCAAGTGA - >AT1G01160.1
ATGCAGCAGCAGCAGTCTCCGCAAATGTTTCCGATGGTTCCGTCGATTCCCCCTGCTAACAACATCACTACCGAACAGATCCAAAAGATGCTTGGTGGGTCAGGAAACTTTGAATCCGGTTTTCAAGAATGGACATTGAAGTTAGATGCTTGCTTGATGTTGTTGTTTTGTACTTTCTCTTGGCTTGATTACCTTGATGAGAACAAGAAGCTGATTATGGCCATCATGGAAAACCAGAATCTCGGTAAACTTGCTGAGTGCGCCCAGTACCAAGCTCTTCTCCAGAAGAACTTGATGTATCTTGCTGCAATTGCTGATGCTCAACCCCCACCACCTACGCCAGGACCTTCACCATCTACAGCTGTCGCTGCCCAGATGGCAACACCGCATTCTGGGATGCAACCACCTAGCTACTTCATGCAACACCCACAAGCATCCCCTGCAGGGATTTTCGCTCCAAGGGGTCCTTTACAGTTTGGTAGCCCACTCCAGTTTCAGGATCCGCAACAGCAGCAGCAGATACATCAGCAAGCTATGCAAGGACACATGGGGATTAGACCAATGGGTATGACCAACAACGGGATGCAGCATGCGATGCAACAACCAGAAACCGGTCTTGGAGGAAACGTGGGGCTTAGAGGAGGAAAGCAAGATGGAGCAGATGGACAAGGAAAAGATGATGGCAAGTGA
Protein Sequence
- >AT1G01160.2
MQQQQSPQMFPMVPSIPPANNITTEQIQKMLGGSGNFESGFQEWTLKLDACLMLLFCTFSWLDYLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIADAQPPPPTPGPSPSTAVAAQMATPHSGMQPPSYFMQHPQASPAGIFAPRGPLQFGSPLQFQDPQQQQQIHQQAMQGHMGIRPMGMTNNGMQHAMQQPETGLGGNVGLRGGKQDGADGQGKDDGK - >AT1G01160.1
MQQQQSPQMFPMVPSIPPANNITTEQIQKMLGGSGNFESGFQEWTLKLDACLMLLFCTFSWLDYLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIADAQPPPPTPGPSPSTAVAAQMATPHSGMQPPSYFMQHPQASPAGIFAPRGPLQFGSPLQFQDPQQQQQIHQQAMQGHMGIRPMGMTNNGMQHAMQQPETGLGGNVGLRGGKQDGADGQGKDDGK