Gene Details:

• Gene ID: AT1G01140
• Gene Symbol: CIPK9, PKS6, SnRK3.12
• Gene Name: CBL-interacting protein kinase 9, PROTEIN KINASE 6, SNF1-RELATED PROTEIN KINASE 3.12
• Description: CBL-interacting protein kinase 9;(source:Araport11)
• TAIR Accession: locus:2035367
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT1G01140.1     AT1G01140.3     AT1G01140.2

Plant Ontology Annotations:

• PO:0000013  — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
• PO:0000230  — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
• PO:0009010  — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
• PO:0009030  — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
• PO:0009032  — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
• PO:0009047  — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
• PO:0025281  — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
• PO:0000084  — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
• PO:0025195  — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
• PO:0000293  — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)

Gene Ontology:

• GO:0009409  — acts upstream of or within — response to cold
• GO:0005515  — enables — protein binding
• GO:0007165  — involved in — signal transduction
• GO:0010555  — acts upstream of or within — response to mannitol
• GO:0051365  — acts upstream of or within — cellular response to potassium ion starvation
• GO:0043266  — acts upstream of or within — regulation of potassium ion transport
• GO:0005737  — located in — cytoplasm
• GO:0009651  — acts upstream of or within — response to salt stress
• GO:0009611  — acts upstream of or within — response to wounding
• GO:0004674  — enables — protein serine/threonine kinase activity
• GO:0006468  — involved in — protein phosphorylation
• GO:0055075  — acts upstream of or within — potassium ion homeostasis

Germplasm Phenotype:

• SALK_058629  — hypersensitive to low potassium media

Function-related keywords:

• cauline leaf ,  inflorescence meristem ,  seed ,  carpel ,  petal ,  stem ,  pollen ,  plant sperm cell ,  pollen tube cell ,  guard cell

Literature:

• miR160 and miR166/165 Contribute to the LEC2-Mediated Auxin Response Involved in the Somatic Embryogenesis Induction in Arabidopsis.   DOI:  10.3389/fpls.2017.02024 ;  PMID:  29321785
• Continuous root xylem formation and vascular acclimation to water deficit involves endodermal ABA signalling via miR165.   DOI:  10.1242/dev.159202 ;  PMID:  29361572
• Functionally Diversified Members of the MIR165/6 Gene Family Regulate Ovule Morphogenesis in Arabidopsis thaliana.   DOI:  10.1093/pcp/pcy042 ;  PMID:  29462472
• Whole Mount in situ Localization of miRNAs and mRNAs During Somatic Embryogenesis in Arabidopsis.   DOI:  10.3389/fpls.2018.01277 ;  PMID:  30233621
• Mobile PEAR transcription factors integrate positional cues to prime cambial growth.   DOI:  10.1038/s41586-018-0839-y ;  PMID:  30626969
• The interaction between miR160 and miR165/166 in the control of leaf development and drought tolerance in Arabidopsis.   DOI:  10.1038/s41598-019-39397-7 ;  PMID:  30808969
• Abiotic stress modulates root patterning via ABA-regulated microRNA expression in the endodermis initials.   DOI:  10.1242/dev.177097 ;  PMID:  31399468
• MicroRNA166 Monitors SPOROCYTELESS/NOZZLE for Building of the Anther Internal Boundary.   DOI:  10.1104/pp.19.00336 ;  PMID:  31248965
• Regulation of ARGONAUTE10 Expression Enables Temporal and Spatial Precision in Axillary Meristem Initiation in Arabidopsis.   DOI:  10.1016/j.devcel.2020.10.019 ;  PMID:  33232670
• Dose-Dependent AGO1-Mediated Inhibition of the miRNA165/166 Pathway Modulates Stem Cell Maintenance in Arabidopsis Shoot Apical Meristem.   DOI:  10.1016/j.xplc.2019.100002 ;  PMID:  33404539
• The receptor-like kinases BAM1 and BAM2 are required for root xylem patterning.   DOI:  10.1073/pnas.2022547118 ;  PMID:  33723062
• Deciphering the role of miRNA in reprogramming plant responses to drought stress.   DOI:  10.1080/07388551.2022.2047880 ;  PMID:  35469523
• The molecular mechanism of microRNA duplex selectivity of Arabidopsis ARGONAUTE10.   DOI:  10.1093/nar/gkac571 ;  PMID:  35801914
• The miR165/166-PHABULOSA module promotes thermotolerance by transcriptionally and posttranslationally regulating HSFA1.   DOI:  10.1093/plcell/koad121 ;  PMID:  37132478
• In the heat of the moment: The miR165/166-PHB module mediates thermotolerance in Arabidopsis.   DOI:  10.1093/plcell/koad148 ;  PMID:  37225407
• The Putative RNA-dependent RNA polymerase RDR6 acts synergistically with ASYMMETRIC LEAVES1 and 2 to repress BREVIPEDICELLUS and MicroRNA165/166 in Arabidopsis leaf development.   DOI:  10.1105/tpc.105.033449 ;  PMID:  16006579
• Arabidopsis ARGONAUTE1 is an RNA Slicer that selectively recruits microRNAs and short interfering RNAs.   DOI:  10.1073/pnas.0505461102 ;  PMID:  16081530
• MIR166/165 genes exhibit dynamic expression patterns in regulating shoot apical meristem and floral development in Arabidopsis.   DOI:  10.1007/s00425-006-0439-1 ;  PMID:  17109148
• Overexpression of miR165 affects apical meristem formation, organ polarity establishment and vascular development in Arabidopsis.   DOI:  10.1093/pcp/pcm008 ;  PMID:  17237362
• Histone deacetylases and ASYMMETRIC LEAVES2 are involved in the establishment of polarity in leaves of Arabidopsis.   DOI:  10.1105/tpc.106.042325 ;  PMID:  17293570
• Genetic interactions between leaf polarity-controlling genes and ASYMMETRIC LEAVES1 and 2 in Arabidopsis leaf patterning.   DOI:  10.1093/pcp/pcm040 ;  PMID:  17395603
• In silico identification of conserved microRNAs in large number of diverse plant species.   DOI:  10.1186/1471-2229-8-37 ;  PMID:  18416839
• Internalization of miPEP165a into Arabidopsis Roots Depends on Both Passive Diffusion and Endocytosis-Associated Processes.   DOI:  10.3390/ijms21072266 ;  PMID:  32218176
• Arabidopsis CYP735A1 and CYP735A2 encode cytokinin hydroxylases that catalyze the biosynthesis of trans-Zeatin.   DOI:  10.1074/jbc.M406337200 ;  PMID:  15280363
• DNA array analyses of Arabidopsis thaliana lacking a vacuolar Na+/H+ antiporter: impact of AtNHX1 on gene expression.   DOI:  10.1111/j.1365-313X.2004.02253.x ;  PMID:  15546358
• Targets of the WRKY53 transcription factor and its role during leaf senescence in Arabidopsis.   DOI:  10.1007/s11103-004-2142-6 ;  PMID:  15604721
• Cytochrome P450 CYP78A9 is involved in Arabidopsis reproductive development.   DOI:  10.1104/pp.113.218214 ;  PMID:  23610218
• Toward understanding the role of CYP78A9 during Arabidopsis reproduction.   DOI:  10.4161/psb.25160 ;  PMID:  23733073
• Analysis of the small GTPase gene superfamily of Arabidopsis.   DOI:  10.1104/pp.013052 ;  PMID:  12644670
• Identification of a vacuolar sucrose transporter in barley and Arabidopsis mesophyll cells by a tonoplast proteomic approach.   DOI:  10.1104/pp.106.079533 ;  PMID:  16581873
• Rab-A2 and Rab-A3 GTPases define a trans-golgi endosomal membrane domain in Arabidopsis that contributes substantially to the cell plate.   DOI:  10.1105/tpc.107.052001 ;  PMID:  18239134
• Null mutants of individual RABA genes impact the proportion of different cell wall components in stem tissue of Arabidopsis thaliana.   DOI:  10.1371/journal.pone.0075724 ;  PMID:  24124508
• DNA binding specificity of ATAF2, a NAC domain transcription factor targeted for degradation by Tobacco mosaic virus.   DOI:  10.1186/1471-2229-12-157 ;  PMID:  22937923
• and Pol III-specific forms of the AC40 subunit and alternative forms of the C53 subunit.   DOI:  10.1093/nar/gkv247 ;  PMID:  25813043
• ATR and ATM play both distinct and additive roles in response to ionizing radiation.   DOI:  10.1111/j.1365-313X.2006.02931.x ;  PMID:  17227549
• A bifunctional enzyme with L-fucokinase and GDP-L-fucose pyrophosphorylase activities salvages free L-fucose in Arabidopsis.   DOI:  10.1074/jbc.M710078200 ;  PMID:  18199744
• 2-Fluoro-L-Fucose Is a Metabolically Incorporated Inhibitor of Plant Cell Wall Polysaccharide Fucosylation.   DOI:  10.1371/journal.pone.0139091 ;  PMID:  26414071
• Inhibition of fucosylation of cell wall components by 2-fluoro 2-deoxy-L-fucose induces defects in root cell elongation.   DOI:  10.1111/tpj.13071 ;  PMID:  26565655

Sequences: