Information report for AT1G01100
Gene Details
|
|
Functional Descriptions
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0006414 — involved in — translational elongation
- GO:0030295 — enables — protein kinase activator activity
- GO:0005829 — located in — cytosol
- GO:0002181 — involved in — cytoplasmic translation
- GO:0022626 — located in — cytosolic ribosome
- GO:0003735 — enables — structural constituent of ribosome
- GO:0005654 — colocalizes with — nucleoplasm
- GO:0005737 — colocalizes with — cytoplasm
- GO:0043021 — enables — ribonucleoprotein complex binding
- GO:0022625 — part of — cytosolic large ribosomal subunit
- GO:0005737 — located in — cytoplasm
Functional Keywords
- cauline leaf , inflorescence meristem , seed , carpel , petal , stem , pollen , plant sperm cell , pollen tube cell , guard cell
Literature and News
- Arabidopsis K+ transporter HAK5-mediated high-affinity root K+ uptake is regulated by protein kinases CIPK1 and CIPK9. DOI: 10.1093/jxb/eraa212 ; PMID: 32484219
- Phospholipase Dα1 mediates the high-Mg(2)(+) stress response partially through regulation of K(+) homeostasis. DOI: 10.1111/pce.13831 ; PMID: 32583878
- Ca(2+)-Dependent Protein Kinase 6 Enhances KAT2 Shaker Channel Activity in Arabidopsis thaliana. DOI: 10.3390/ijms22041596 ; PMID: 33562460
- Mitogen-activated protein kinase 6 negatively regulates secondary wall biosynthesis by modulating MYB46 protein stability in Arabidopsis thaliana. DOI: 10.1371/journal.pgen.1009510 ; PMID: 33826618
- CIPK9 targets VDAC3 and modulates oxidative stress responses in Arabidopsis. DOI: 10.1111/tpj.15572 ; PMID: 34748255
- Quantitative Phosphoproteomics of cipk3/9/23/26 Mutant and Wild Type in Arabidopsis thaliana. DOI: 10.3390/genes12111759 ; PMID: 34828365
- Ca(2+)-dependent successive phosphorylation of vacuolar transporter MTP8 by CBL2/3-CIPK3/9/26 and CPK5 is critical for manganese homeostasis in Arabidopsis. DOI: 10.1016/j.molp.2021.11.012 ; PMID: 34848347
- Kinase CIPK9 integrates glucose and abscisic acid signaling to regulate seed oil metabolism in rapeseed. DOI: 10.1093/plphys/kiac569 ; PMID: 36494098
- Potassium nutrient status drives posttranslational regulation of a low-K response network in Arabidopsis. DOI: 10.1038/s41467-023-35906-5 ; PMID: 36690625
- Functional bioinformatics for Arabidopsis thaliana. DOI: 10.1093/bioinformatics/btl051 ; PMID: 16481336
- The AtGRF family of putative transcription factors is involved in leaf and cotyledon growth in Arabidopsis. DOI: 10.1046/j.1365-313x.2003.01862.x ; PMID: 12974814
- A transcriptional coactivator, AtGIF1, is involved in regulating leaf growth and morphology in Arabidopsis. DOI: 10.1073/pnas.0405450101 ; PMID: 15326298
- The Arabidopsis GRF-INTERACTING FACTOR gene family performs an overlapping function in determining organ size as well as multiple developmental properties. DOI: 10.1104/pp.109.141838 ; PMID: 19648231
- Stable establishment of cotyledon identity during embryogenesis in Arabidopsis by ANGUSTIFOLIA3 and HANABA TARANU. DOI: 10.1242/dev.081547 ; PMID: 22669825
- The Arabidopsis thaliana GRF-INTERACTING FACTOR gene family plays an essential role in control of male and female reproductive development. DOI: 10.1016/j.ydbio.2013.12.009 ; PMID: 24355747
- Spatio-temporal distribution patterns of GRF-INTERACTING FACTOR expression and leaf size control. DOI: 10.4161/psb.29697 ; PMID: 25763702
- GROWTH-REGULATING FACTOR and GRF-INTERACTING FACTOR Specify Meristematic Cells of Gynoecia and Anthers. DOI: 10.1104/pp.17.00960 ; PMID: 29114079
- GIF Transcriptional Coregulators Control Root Meristem Homeostasis. DOI: 10.1105/tpc.17.00856 ; PMID: 29352064
- Comprehensive characterization of three classes of Arabidopsis SWI/SNF chromatin remodelling complexes. DOI: 10.1038/s41477-022-01282-z ; PMID: 36471048
- Gene trap lines define domains of gene regulation in Arabidopsis petals and stamens. DOI: 10.1105/tpc.105.033985 ; PMID: 16055634
- Proteomic and transcriptomic analysis of Arabidopsis seeds: molecular evidence for successive processing of seed proteins and its implication in the stress response to sulfur nutrition. DOI: 10.1111/j.1365-313X.2006.02900.x ; PMID: 17059406
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- The hydrophobic proteome of mitochondrial membranes from Arabidopsis cell suspensions. DOI: 10.1016/j.phytochem.2004.03.028 ; PMID: 15276431
- Functional gene-mining for salt-tolerance genes with the power of Arabidopsis. DOI: 10.1111/j.1365-313X.2008.03602.x ; PMID: 18643972
- Evolution of Arabidopsis microRNA families through duplication events. DOI: 10.1101/gr.4680506 ; PMID: 16520461
- Computational identification of plant microRNAs and their targets, including a stress-induced miRNA. DOI: 10.1016/j.molcel.2004.05.027 ; PMID: 15200956
- betaC1, the pathogenicity factor of TYLCCNV, interacts with AS1 to alter leaf development and suppress selective jasmonic acid responses. DOI: 10.1101/gad.1682208 ; PMID: 18794352
- The ARGONAUTE10 gene modulates shoot apical meristem maintenance and establishment of leaf polarity by repressing miR165/166 in Arabidopsis. DOI: 10.1111/j.1365-313X.2008.03757.x ; PMID: 19054365
- Transcriptional, post-transcriptional and post-translational regulations of gene expression during leaf polarity formation. DOI: 10.1038/cr.2007.45 ; PMID: 17549070
- Regulation of HD-ZIP III Genes by MicroRNA 165. DOI: 10.4161/psb.2.5.4119 ; PMID: 19704656
Gene Resources
- UniProt: A0A178WHE0
- EMBL: CACSHJ010000087, LUHQ01000001
- AlphaFoldDB: A0A178WHE0
- EnsemblPlants: AT1G01100.1, AT1G01100.2, AT1G01100.4
- Gramene: AT1G01100.1, AT1G01100.2, AT1G01100.4
- KEGG: ath:AT1G01100
- Orthologous matrix: IEPYWPM
- ExpressionAtlas: AT1G01100
- InterPro: IPR027534, IPR038716
- PANTHER: PTHR45696, PTHR45696:SF42
- Gene3D: 1.10.10.1410
- OrthoDB: A0A178WHE0
- SWISS-MODEL: A0A178WHE0
- Conserved Domain Database: cd05831
Homologs
- Cucumis sativus CsGy1G000010
Sequences
cDNA Sequence
- >AT1G01100.2
CTGCATCTCCCGTCTCCGCATCCAAACCCTAGAAATTTTGTCTCTCTCGCCGCCTTGCGAAAAGCATTTTCGATCTTACTCTTAGGATAAAAAAATGTCGACAGTTGGAGAGCTTGCTTGCAGCTACGCTGTTATGATCCTCGAGGACGAGGGTATCGCTATCACGGCTGACAAAATCGCGACCTTGGTGAAAGCTGCTGGTGTTAGTATTGAGTCATACTGGCCAATGCTATTCGCCAAGATGGCTGAGAAACGTAACGTGACTGATCTCATCATGAACGTTGGTGCTGGTGGTGGAGGTGGTGCTCCGGTTGCAGCTGCTGCTCCAGCTGCTGGCGGTGGTGCGGCAGCTGCTCCTGCTGCTGAGGAGAAGAAGAAGGATGAGCCAGCAGAAGAGAGTGACGGAGATTTGGGTTTCGGTTTGTTTGACTAAACGCAGTCACTTGTCTTTCTTCTTTGTAGTTGGATATTGGAGACTATATTTTGTCGTATGAGTTATTATTACTTGTTTGATCTGGCTAAAGGACTATTAGTTGGTTTATGATGCGTATGTTGTATAACTCAAGTTTCCTAGCAAACCAATCGGCTCGGGCTTTTGTTAGAATTGATTTTGTTTATTTTCTACCAAGTCTTCGTTCATCAAATATAGGTCTTTAATTTCGAAAACGTCAAACCATAAATGTTAAATCCGGTCATACAATATTTAGAATTGTCATCAAATATAGGTCTTTAATAAAATTGGCTTTTGCAGTAATGTTAGGCCGGCCCAATGCCTTTATTATCGGAACATGTTAGTGTTTGTTCTTCT - >AT1G01100.1
CTGCATCTCCCGTCTCCGCATCCAAACCCTAGAAATTTTGTCTCTCTCGCCGCCTTGCGAAAAGCATTTTCGATCTTACTCTTAGGATAAAAAAATGTCGACAGTTGGAGAGCTTGCTTGCAGCTACGCTGTTATGATCCTCGAGGACGAGGGTATCGCTATCACGGCTGACAAAATCGCGACCTTGGTGAAAGCTGCTGGTGTTAGTATTGAGTCATACTGGCCAATGCTATTCGCCAAGATGGCTGAGAAACGTAACGTGACTGATCTCATCATGAACGTTGGTGCTGGTGGTGGAGGTGGTGCTCCGGTTGCAGCTGCTGCTCCAGCTGCTGGCGGTGGTGCGGCAGCTGCTCCTGCTGCTGAGGAGAAGAAGAAGGATGAGCCAGCAGAAGAGAGTGACGGAGATTTGGGTTTCGGTTTGTTTGACTAAACGCAGTCACTTGTCTTTCTTCTTTGTAGTTGGATATTGGAGACTATATTTTGTCGTATGAGTTATTATTACTTGTTTGATCTGGCTAAAGGACTATTAGTTGGTTTATGATGCGTATGTTGTATAACTCAAGTTTCCTAGCAAACCAATCGGCTCGGGCTTTTGTTAGAATTGATTTTGTTTATTTTCTACCAAGTCTTCGTTCATCAAATATAGGTCTTTAATTTCGAAAACGTCAAACCATAAATGTTAAATCCGGTCATACAATATTTAGAATTGTCATCAAATATAGGTCTTTAATAAAATTGGCTTTTGCAGTAATGTTAGGCCGGCCCAATGCCTTTATTATCGGAACATGTTAGTGTTTGTTCTTCT - >AT1G01100.3
CTGCATCTCCCGTCTCCGCATCCAAACCCTAGAAATTTTGTCTCTCTCGCCGCCTTGCGAAAAGCATTTTCGATCTTACTCTTAGGATAAAAAAATGTCGACAGTTGGAGAGCTTGCTTGCAGCTACGCTGTTATGATCCTCGAGGACGAGGGTATCGCTATCACGGCTGACAAAATCGCGACCTTGGTGAAAGCTGCTGGTGTTAGTATTGAGTCATACTGGCCAATGCTATTCGCCAAGATGGCTGAGAAACGTAACGTGACTGATCTCATCATGAACGTTGGTGCTGGTGGTGGAGGTGGTGCTCCGGTTGCAGCTGCTGCTCCAGCTGCTGGCGGTGGTGCGGCAGCTGCTCCTGCTGCTGAGGAGAAGAAGAAGGATGAGCCAGCAGAAGAGAGTGACGGAGATTTGGGTTTCGGTTTGTTTGACTAAACGCAGTCACTTGTCTTTCTTCTTTGTAGTTGGATATTGGAGACTATATTTTGTCGTATGAGTTATTATTACTTGTTTGATCTGGCTAAAGGACTATTAGTTGGTTTATGATGCGTATGTTGTATAACTCAAGTTTCCTAGCAAACCAATCGGCTCGGGCTTTTGTTAGAATTGATTTTGTTTATTTTCTACCAAGTCTTCGTTCATCAAATATAGGTCTTTAATTTCGAAAACGTCAAACCATAAATGTTAAATCCGGTCATACAATATTTAGAATTGTCATCAAATATAGGTCTTTAATAAAATTGGCTTTTGCAGTAATGTTAGGCCGGCCCAATGCCTTTATTATCGGAACATGTTAGTGTTTGTTCTTCT - >AT1G01100.4
CTGCATCTCCCGTCTCCGCATCCAAACCCTAGAAATTTTGTCTCTCTCGCCGCCTTGCGAAAAGCATTTTCGATCTTACTCTTAGGATAAAAAAATGTCGACAGTTGGAGAGCTTGCTTGCAGCTACGCTGTTATGATCCTCGAGGACGAGGGTATCGCTATCACGGCTGACAAAATCGCGACCTTGGTGAAAGCTGCTGGTGTTAGTATTGAGTCATACTGGCCAATGCTATTCGCCAAGATGGCTGAGAAACGTAACGTGACTGATCTCATCATGAACGTTGGTGCTGGTGGTGGAGGTGGTGCTCCGGTTGCAGCTGCTGCTCCAGCTGCTGGCGGTGGTGCGGCAGCTGCTCCTGCTGCTGAGGAGAAGAAGAAGGATGAGCCAGCAGAAGAGAGTGACGGAGATTTGGGTTTCGGTTTGTTTGACTAAACGCAGTCACTTGTCTTTCTTCTTTGTAGTTGGATATTGGAGACTATATTTTGTCGTATGAGTTATTATTACTTGTTTGATCTGGCTAAAGGACTATTAGTTGGTTTATGATGCGTATGTTGTATAACTCAAGTTTCCTAGCAAACCAATCGGCTCGGGCTTTTGTTAGAATTGATTTTGTTTATTTTCTACCAAGTCTTCGTTCATCAAATATAGGTCTTTAATTTCGAAAACGTCAAACCATAAATGTTAAATCCGGTCATACAATATTTAGAATTGTCATCAAATATAGGTCTTTAATAAAATTGGCTTTTGCAGTAATGTTAGGCCGGCCCAATGCCTTTATTATCGGAACATGTTAGTGTTTGTTCTTCT
CDS Sequence
- >AT1G01100.2
ATGTCGACAGTTGGAGAGCTTGCTTGCAGCTACGCTGTTATGATCCTCGAGGACGAGGGTATCGCTATCACGGCTGACAAAATCGCGACCTTGGTGAAAGCTGCTGGTGTTAGTATTGAGTCATACTGGCCAATGCTATTCGCCAAGATGGCTGAGAAACGTAACGTGACTGATCTCATCATGAACGTTGGTGCTGGTGGTGGAGGTGGTGCTCCGGTTGCAGCTGCTGCTCCAGCTGCTGGCGGTGGTGCGGCAGCTGCTCCTGCTGCTGAGGAGAAGAAGAAGGATGAGCCAGCAGAAGAGAGTGACGGAGATTTGGGTTTCGGTTTGTTTGACTAA - >AT1G01100.1
ATGTCGACAGTTGGAGAGCTTGCTTGCAGCTACGCTGTTATGATCCTCGAGGACGAGGGTATCGCTATCACGGCTGACAAAATCGCGACCTTGGTGAAAGCTGCTGGTGTTAGTATTGAGTCATACTGGCCAATGCTATTCGCCAAGATGGCTGAGAAACGTAACGTGACTGATCTCATCATGAACGTTGGTGCTGGTGGTGGAGGTGGTGCTCCGGTTGCAGCTGCTGCTCCAGCTGCTGGCGGTGGTGCGGCAGCTGCTCCTGCTGCTGAGGAGAAGAAGAAGGATGAGCCAGCAGAAGAGAGTGACGGAGATTTGGGTTTCGGTTTGTTTGACTAA - >AT1G01100.3
ATGTCGACAGTTGGAGAGCTTGCTTGCAGCTACGCTGTTATGATCCTCGAGGACGAGGGTATCGCTATCACGGCTGACAAAATCGCGACCTTGGTGAAAGCTGCTGGTGTTAGTATTGAGTCATACTGGCCAATGCTATTCGCCAAGATGGCTGAGAAACGTAACGTGACTGATCTCATCATGAACGTTGGTGCTGGTGGTGGAGGTGGTGCTCCGGTTGCAGCTGCTGCTCCAGCTGCTGGCGGTGGTGCGGCAGCTGCTCCTGCTGCTGAGGAGAAGAAGAAGGATGAGCCAGCAGAAGAGAGTGACGGAGATTTGGGTTTCGGTTTGTTTGACTAA - >AT1G01100.4
ATGTCGACAGTTGGAGAGCTTGCTTGCAGCTACGCTGTTATGATCCTCGAGGACGAGGGTATCGCTATCACGGCTGACAAAATCGCGACCTTGGTGAAAGCTGCTGGTGTTAGTATTGAGTCATACTGGCCAATGCTATTCGCCAAGATGGCTGAGAAACGTAACGTGACTGATCTCATCATGAACGTTGGTGCTGGTGGTGGAGGTGGTGCTCCGGTTGCAGCTGCTGCTCCAGCTGCTGGCGGTGGTGCGGCAGCTGCTCCTGCTGCTGAGGAGAAGAAGAAGGATGAGCCAGCAGAAGAGAGTGACGGAGATTTGGGTTTCGGTTTGTTTGACTAA
Protein Sequence
- >AT1G01100.2
MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLIMNVGAGGGGGAPVAAAAPAAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD - >AT1G01100.1
MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLIMNVGAGGGGGAPVAAAAPAAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD - >AT1G01100.3
MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLIMNVGAGGGGGAPVAAAAPAAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD - >AT1G01100.4
MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLIMNVGAGGGGGAPVAAAAPAAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD