Information report for AT1G01080
Gene Details
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Functional Descriptions
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0009536 — located in — plastid
- GO:0009941 — located in — chloroplast envelope
- GO:0005634 — located in — nucleus
- GO:0003729 — enables — mRNA binding
- GO:0009507 — located in — chloroplast
- GO:0009570 — located in — chloroplast stroma
- GO:1901259 — involved in — chloroplast rRNA processing
Functional Keywords
- cauline leaf , inflorescence meristem , seed , carpel , petal , stem , pollen , guard cell
Literature and News
- The VLCFA elongase gene family in Arabidopsis thaliana: phylogenetic analysis, 3D modelling and expression profiling. DOI: 10.1007/s11103-008-9339-z ; PMID: 18465198
- Inhibition of saturated very-long-chain fatty acid biosynthesis by mefluidide and perfluidone, selective inhibitors of 3-ketoacyl-CoA synthases. DOI: 10.1016/j.phytochem.2011.12.023 ; PMID: 22284369
- Very-long-chain fatty acids restrict regeneration capacity by confining pericycle competence for callus formation in Arabidopsis. DOI: 10.1073/pnas.1522466113 ; PMID: 27092001
- Arabidopsis HSP70-16 is required for flower opening under normal or mild heat stress temperatures. DOI: 10.1111/pce.13480 ; PMID: 30426513
- AKR2A interacts with KCS1 to improve VLCFAs contents and chilling tolerance of Arabidopsis thaliana. DOI: 10.1111/tpj.14848 ; PMID: 32433816
- The Geomagnetic Field (GMF) Modulates Nutrient Status and Lipid Metabolism during Arabidopsis thaliana Plant Development. DOI: 10.3390/plants9121729 ; PMID: 33302398
- AP2/ERF transcription factors orchestrate very long chain fatty acid biosynthesis during Arabidopsis lateral root development. DOI: 10.1016/j.molp.2021.01.004 ; PMID: 33450371
- PUCHI Regulates Giant Cell Morphology During Root-Knot Nematode Infection in Arabidopsis thaliana. DOI: 10.3389/fpls.2021.755610 ; PMID: 34691131
- Tackling functional redundancy of Arabidopsis fatty acid elongase complexes. DOI: 10.3389/fpls.2023.1107333 ; PMID: 36798704
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- Substrate specificity of Arabidopsis 3-ketoacyl-CoA synthases. DOI: 10.1016/j.bbrc.2006.05.162 ; PMID: 16765910
Gene Resources
- UniProt: Q8W592
- EMBL: AF419554, AY086138, AY132012
- AlphaFoldDB: Q8W592
- EnsemblPlants: AT1G01080.1
- Gramene: AT1G01080.1
- Orthologous matrix: AIIPSCS
- ExpressionAtlas: AT1G01080
Homologs
- Beta vulgaris BVRB_9g217440
- Brachypodium distachyon BRADI_1g12787v3
Sequences
cDNA Sequence
- >AT1G01080.1
AAAGTGTTTGGTAAAGGGAATAAGAGACTTGAAGAAATGAAAATGTTTGAATAATTTTTTATTTTTTGATTTATAACTTTGGGCCTTTTGTTTATTTCATGAAAAACAAAACCTGCTACGCGAAAGAGAGTGTCTCATCTGACGTAGCGAATACCGAGCAGGATTGTAACGGGTTAAATGACCCGACCCGATTTGTTCTATTAATTTCTATTTCATTTCTTTTTTTTTTAATCATTCTTCTCAAATAATTTACTTTCTGGTCCTTCGATAATGGCGGCCTCCTGCTTCGCAATTCCCTTATCTTCTTCTTCTCGATCGTCTCACAATGCAATTCCCAAATACAAAACCCTAATCTCTTCTTCTTCTTACTCTTACTTAGAATCTCTGAAACTTCAATTCTCTTCTTCCAATTCTTTTCATCACTCTTCTCTTTCTCGTCCCTTTGTAGCTCAACCACTTCAAATCAAGGTCTCTTCTTCAGAATTATCAGTTCTCGATGAAGAAAAAGAAGAAGAAGTAGTTAAAGGAGAAGCAGAACCCAATAAAGATAGTGTCGTCTCCAAAGCAGAACCAGTAAAGAAACCGAGACCTTGCGAGCTCTACGTGTGTAATATCCCTAGAAGCTACGACATTGCTCAGCTTCTTGACATGTTTCAGCCTTTTGGAACTGTAATCTCTGTAGAGGTATCGCGAAATCCTCAGACGGGAGAGAGCCGTGGAAGCGGGTACGTGACAATGGGTTCTATAAACTCTGCCAAAATCGCCATTGCTTCTCTTGATGGAACAGAAGTAGGTGGTCGGGAAATGCGGGTTAGGTACTCTGTTGACATGAATCCAGGAACAAGAAGAAACCCTGAAGTCTTGAACTCAACTCCAAAGAAGATTCTGATGTACGAAAGCCAACACAAGGTCTATGTCGGAAATCTCCCTTGGTTCACACAGCCTGATGGTTTGAGAAACCACTTTAGCAAGTTTGGCACAATCGTAAGCACGAGAGTGTTACATGATCGTAAGACCGGGAGAAACAGAGTCTTTGCCTTTCTTTCTTTTACAAGCGGTGAAGAACGTGATGCGGCTTTATCATTCAATGGAACACAATATGAAGGTCGCAGAATCATCGTCAGAGAAGGTATCGAGAAGAGTGAGTCGTAAACCAACTGTTCTGCTTTTGCTGCAAAGACATCTCTTGGACACAAACAATGTGTAATGAATGTCTTCTGATTTCTTCGACAAGTAACCTTTACATATTATATCCTTCTCGATTTTGTTTATCACCCATTATATCTACCTGTATAATTCTCTTTTCGATCTTCTTCTTCGATTCATCTACTCTACAAATGAAAGATAATCGTCAAACCTCCCCAACTGTCGTCTCACTCTAACATTTTGCCAAACACTTGGTGTGCATGCAATACTCAGGTTCCAAATAAAGAAAACAGAACCATTAGCATCTTCATTTTGTAAGGCTTAACTCCGAGGATCCGATTCGGAGACCCGAATAAGGATTTAGGATCCACACACGACTTTCGTCACTCTCCGATTCCATTCCCCGTTGGAGAAGATCAACCAACTAGGGTTTTAAATCTCGGGAGGAGACTGAAAAAGGCCATAAATGATAAATGGGCTTTATATTTGTTTAGGCCCAGTGAAATGATTTCAAGTGGGCCCATCTGATAACTACCTCC - >AT1G01080.3
AAAGTGTTTGGTAAAGGGAATAAGAGACTTGAAGAAATGAAAATGTTTGAATAATTTTTTATTTTTTGATTTATAACTTTGGGCCTTTTGTTTATTTCATGAAAAACAAAACCTGCTACGCGAAAGAGAGTGTCTCATCTGACGTAGCGAATACCGAGCAGGATTGTAACGGGTTAAATGACCCGACCCGATTTGTTCTATTAATTTCTATTTCATTTCTTTTTTTTTTAATCATTCTTCTCAAATAATTTACTTTCTGGTCCTTCGATAATGGCGGCCTCCTGCTTCGCAATTCCCTTATCTTCTTCTTCTCGATCGTCTCACAATGCAATTCCCAAATACAAAACCCTAATCTCTTCTTCTTCTTACTCTTACTTAGAATCTCTGAAACTTCAATTCTCTTCTTCCAATTCTTTTCATCACTCTTCTCTTTCTCGTCCCTTTGTAGCTCAACCACTTCAAATCAAGGTCTCTTCTTCAGAATTATCAGTTCTCGATGAAGAAAAAGAAGAAGAAGTAGTTAAAGGAGAAGCAGAACCCAATAAAGATAGTGTCGTCTCCAAAGCAGAACCAGTAAAGAAACCGAGACCTTGCGAGCTCTACGTGTGTAATATCCCTAGAAGCTACGACATTGCTCAGCTTCTTGACATGTTTCAGCCTTTTGGAACTGTAATCTCTGTAGAGGTATCGCGAAATCCTCAGACGGGAGAGAGCCGTGGAAGCGGGTACGTGACAATGGGTTCTATAAACTCTGCCAAAATCGCCATTGCTTCTCTTGATGGAACAGAAGTAGGTGGTCGGGAAATGCGGGTTAGGTACTCTGTTGACATGAATCCAGGAACAAGAAGAAACCCTGAAGTCTTGAACTCAACTCCAAAGAAGATTCTGATGTACGAAAGCCAACACAAGGTCTATGTCGGAAATCTCCCTTGGTTCACACAGCCTGATGGTTTGAGAAACCACTTTAGCAAGTTTGGCACAATCGTAAGCACGAGAGTGTTACATGATCGTAAGACCGGGAGAAACAGAGTCTTTGCCTTTCTTTCTTTTACAAGCGGTGAAGAACGTGATGCGGCTTTATCATTCAATGGAACACAATATGAAGGTCGCAGAATCATCGTCAGAGAAGGTATCGAGAAGAGTGAGTCGTAAACCAACTGTTCTGCTTTTGCTGCAAAGACATCTCTTGGACACAAACAATGTGTAATGAATGTCTTCTGATTTCTTCGACAAGTAACCTTTACATATTATATCCTTCTCGATTTTGTTTATCACCCATTATATCTACCTGTATAATTCTCTTTTCGATCTTCTTCTTCGATTCATCTACTCTACAAATGAAAGATAATCGTCAAACCTCCCCAACTGTCGTCTCACTCTAACATTTTGCCAAACACTTGGTGTGCATGCAATACTCAGGTTCCAAATAAAGAAAACAGAACCATTAGCATCTTCATTTTGTAAGGCTTAACTCCGAGGATCCGATTCGGAGACCCGAATAAGGATTTAGGATCCACACACGACTTTCGTCACTCTCCGATTCCATTCCCCGTTGGAGAAGATCAACCAACTAGGGTTTTAAATCTCGGGAGGAGACTGAAAAAGGCCATAAATGATAAATGGGCTTTATATTTGTTTAGGCCCAGTGAAATGATTTCAAGTGGGCCCATCTGATAACTACCTCC - >AT1G01080.2
AAAGTGTTTGGTAAAGGGAATAAGAGACTTGAAGAAATGAAAATGTTTGAATAATTTTTTATTTTTTGATTTATAACTTTGGGCCTTTTGTTTATTTCATGAAAAACAAAACCTGCTACGCGAAAGAGAGTGTCTCATCTGACGTAGCGAATACCGAGCAGGATTGTAACGGGTTAAATGACCCGACCCGATTTGTTCTATTAATTTCTATTTCATTTCTTTTTTTTTTAATCATTCTTCTCAAATAATTTACTTTCTGGTCCTTCGATAATGGCGGCCTCCTGCTTCGCAATTCCCTTATCTTCTTCTTCTCGATCGTCTCACAATGCAATTCCCAAATACAAAACCCTAATCTCTTCTTCTTCTTACTCTTACTTAGAATCTCTGAAACTTCAATTCTCTTCTTCCAATTCTTTTCATCACTCTTCTCTTTCTCGTCCCTTTGTAGCTCAACCACTTCAAATCAAGGTCTCTTCTTCAGAATTATCAGTTCTCGATGAAGAAAAAGAAGAAGAAGTAGTTAAAGGAGAAGCAGAACCCAATAAAGATAGTGTCGTCTCCAAAGCAGAACCAGTAAAGAAACCGAGACCTTGCGAGCTCTACGTGTGTAATATCCCTAGAAGCTACGACATTGCTCAGCTTCTTGACATGTTTCAGCCTTTTGGAACTGTAATCTCTGTAGAGGTATCGCGAAATCCTCAGACGGGAGAGAGCCGTGGAAGCGGGTACGTGACAATGGGTTCTATAAACTCTGCCAAAATCGCCATTGCTTCTCTTGATGGAACAGAAGTAGGTGGTCGGGAAATGCGGGTTAGGTACTCTGTTGACATGAATCCAGGAACAAGAAGAAACCCTGAAGTCTTGAACTCAACTCCAAAGAAGATTCTGATGTACGAAAGCCAACACAAGGTCTATGTCGGAAATCTCCCTTGGTTCACACAGCCTGATGGTTTGAGAAACCACTTTAGCAAGTTTGGCACAATCGTAAGCACGAGAGTGTTACATGATCGTAAGACCGGGAGAAACAGAGTCTTTGCCTTTCTTTCTTTTACAAGCGGTGAAGAACGTGATGCGGCTTTATCATTCAATGGAACACAATATGAAGGTCGCAGAATCATCGTCAGAGAAGGTATCGAGAAGAGTGAGTCGTAAACCAACTGTTCTGCTTTTGCTGCAAAGACATCTCTTGGACACAAACAATGTGTAATGAATGTCTTCTGATTTCTTCGACAAGTAACCTTTACATATTATATCCTTCTCGATTTTGTTTATCACCCATTATATCTACCTGTATAATTCTCTTTTCGATCTTCTTCTTCGATTCATCTACTCTACAAATGAAAGATAATCGTCAAACCTCCCCAACTGTCGTCTCACTCTAACATTTTGCCAAACACTTGGTGTGCATGCAATACTCAGGTTCCAAATAAAGAAAACAGAACCATTAGCATCTTCATTTTGTAAGGCTTAACTCCGAGGATCCGATTCGGAGACCCGAATAAGGATTTAGGATCCACACACGACTTTCGTCACTCTCCGATTCCATTCCCCGTTGGAGAAGATCAACCAACTAGGGTTTTAAATCTCGGGAGGAGACTGAAAAAGGCCATAAATGATAAATGGGCTTTATATTTGTTTAGGCCCAGTGAAATGATTTCAAGTGGGCCCATCTGATAACTACCTCC
CDS Sequence
- >AT1G01080.1
ATGGCGGCCTCCTGCTTCGCAATTCCCTTATCTTCTTCTTCTCGATCGTCTCACAATGCAATTCCCAAATACAAAACCCTAATCTCTTCTTCTTCTTACTCTTACTTAGAATCTCTGAAACTTCAATTCTCTTCTTCCAATTCTTTTCATCACTCTTCTCTTTCTCGTCCCTTTGTAGCTCAACCACTTCAAATCAAGGTCTCTTCTTCAGAATTATCAGTTCTCGATGAAGAAAAAGAAGAAGAAGTAGTTAAAGGAGAAGCAGAACCCAATAAAGATAGTGTCGTCTCCAAAGCAGAACCAGTAAAGAAACCGAGACCTTGCGAGCTCTACGTGTGTAATATCCCTAGAAGCTACGACATTGCTCAGCTTCTTGACATGTTTCAGCCTTTTGGAACTGTAATCTCTGTAGAGGTATCGCGAAATCCTCAGACGGGAGAGAGCCGTGGAAGCGGGTACGTGACAATGGGTTCTATAAACTCTGCCAAAATCGCCATTGCTTCTCTTGATGGAACAGAAGTAGGTGGTCGGGAAATGCGGGTTAGGTACTCTGTTGACATGAATCCAGGAACAAGAAGAAACCCTGAAGTCTTGAACTCAACTCCAAAGAAGATTCTGATGTACGAAAGCCAACACAAGGTCTATGTCGGAAATCTCCCTTGGTTCACACAGCCTGATGGTTTGAGAAACCACTTTAGCAAGTTTGGCACAATCGTAAGCACGAGAGTGTTACATGATCGTAAGACCGGGAGAAACAGAGTCTTTGCCTTTCTTTCTTTTACAAGCGGTGAAGAACGTGATGCGGCTTTATCATTCAATGGAACACAATATGAAGGTCGCAGAATCATCGTCAGAGAAGGTATCGAGAAGAGTGAGTCGTAA - >AT1G01080.3
ATGGCGGCCTCCTGCTTCGCAATTCCCTTATCTTCTTCTTCTCGATCGTCTCACAATGCAATTCCCAAATACAAAACCCTAATCTCTTCTTCTTCTTACTCTTACTTAGAATCTCTGAAACTTCAATTCTCTTCTTCCAATTCTTTTCATCACTCTTCTCTTTCTCGTCCCTTTGTAGCTCAACCACTTCAAATCAAGGTCTCTTCTTCAGAATTATCAGTTCTCGATGAAGAAAAAGAAGAAGAAGTAGTTAAAGGAGAAGCAGAACCCAATAAAGATAGTGTCGTCTCCAAAGCAGAACCAGTAAAGAAACCGAGACCTTGCGAGCTCTACGTGTGTAATATCCCTAGAAGCTACGACATTGCTCAGCTTCTTGACATGTTTCAGCCTTTTGGAACTGTAATCTCTGTAGAGGTATCGCGAAATCCTCAGACGGGAGAGAGCCGTGGAAGCGGGTACGTGACAATGGGTTCTATAAACTCTGCCAAAATCGCCATTGCTTCTCTTGATGGAACAGAAGTAGGTGGTCGGGAAATGCGGGTTAGGTACTCTGTTGACATGAATCCAGGAACAAGAAGAAACCCTGAAGTCTTGAACTCAACTCCAAAGAAGATTCTGATGTACGAAAGCCAACACAAGGTCTATGTCGGAAATCTCCCTTGGTTCACACAGCCTGATGGTTTGAGAAACCACTTTAGCAAGTTTGGCACAATCGTAAGCACGAGAGTGTTACATGATCGTAAGACCGGGAGAAACAGAGTCTTTGCCTTTCTTTCTTTTACAAGCGGTGAAGAACGTGATGCGGCTTTATCATTCAATGGAACACAATATGAAGGTCGCAGAATCATCGTCAGAGAAGGTATCGAGAAGAGTGAGTCGTAA - >AT1G01080.2
ATGGCGGCCTCCTGCTTCGCAATTCCCTTATCTTCTTCTTCTCGATCGTCTCACAATGCAATTCCCAAATACAAAACCCTAATCTCTTCTTCTTCTTACTCTTACTTAGAATCTCTGAAACTTCAATTCTCTTCTTCCAATTCTTTTCATCACTCTTCTCTTTCTCGTCCCTTTGTAGCTCAACCACTTCAAATCAAGGTCTCTTCTTCAGAATTATCAGTTCTCGATGAAGAAAAAGAAGAAGAAGTAGTTAAAGGAGAAGCAGAACCCAATAAAGATAGTGTCGTCTCCAAAGCAGAACCAGTAAAGAAACCGAGACCTTGCGAGCTCTACGTGTGTAATATCCCTAGAAGCTACGACATTGCTCAGCTTCTTGACATGTTTCAGCCTTTTGGAACTGTAATCTCTGTAGAGGTATCGCGAAATCCTCAGACGGGAGAGAGCCGTGGAAGCGGGTACGTGACAATGGGTTCTATAAACTCTGCCAAAATCGCCATTGCTTCTCTTGATGGAACAGAAGTAGGTGGTCGGGAAATGCGGGTTAGGTACTCTGTTGACATGAATCCAGGAACAAGAAGAAACCCTGAAGTCTTGAACTCAACTCCAAAGAAGATTCTGATGTACGAAAGCCAACACAAGGTCTATGTCGGAAATCTCCCTTGGTTCACACAGCCTGATGGTTTGAGAAACCACTTTAGCAAGTTTGGCACAATCGTAAGCACGAGAGTGTTACATGATCGTAAGACCGGGAGAAACAGAGTCTTTGCCTTTCTTTCTTTTACAAGCGGTGAAGAACGTGATGCGGCTTTATCATTCAATGGAACACAATATGAAGGTCGCAGAATCATCGTCAGAGAAGGTATCGAGAAGAGTGAGTCGTAA
Protein Sequence
- >AT1G01080.1
MAASCFAIPLSSSSRSSHNAIPKYKTLISSSSYSYLESLKLQFSSSNSFHHSSLSRPFVAQPLQIKVSSSELSVLDEEKEEEVVKGEAEPNKDSVVSKAEPVKKPRPCELYVCNIPRSYDIAQLLDMFQPFGTVISVEVSRNPQTGESRGSGYVTMGSINSAKIAIASLDGTEVGGREMRVRYSVDMNPGTRRNPEVLNSTPKKILMYESQHKVYVGNLPWFTQPDGLRNHFSKFGTIVSTRVLHDRKTGRNRVFAFLSFTSGEERDAALSFNGTQYEGRRIIVREGIEKSES - >AT1G01080.3
MAASCFAIPLSSSSRSSHNAIPKYKTLISSSSYSYLESLKLQFSSSNSFHHSSLSRPFVAQPLQIKVSSSELSVLDEEKEEEVVKGEAEPNKDSVVSKAEPVKKPRPCELYVCNIPRSYDIAQLLDMFQPFGTVISVEVSRNPQTGESRGSGYVTMGSINSAKIAIASLDGTEVGGREMRVRYSVDMNPGTRRNPEVLNSTPKKILMYESQHKVYVGNLPWFTQPDGLRNHFSKFGTIVSTRVLHDRKTGRNRVFAFLSFTSGEERDAALSFNGTQYEGRRIIVREGIEKSES - >AT1G01080.2
MAASCFAIPLSSSSRSSHNAIPKYKTLISSSSYSYLESLKLQFSSSNSFHHSSLSRPFVAQPLQIKVSSSELSVLDEEKEEEVVKGEAEPNKDSVVSKAEPVKKPRPCELYVCNIPRSYDIAQLLDMFQPFGTVISVEVSRNPQTGESRGSGYVTMGSINSAKIAIASLDGTEVGGREMRVRYSVDMNPGTRRNPEVLNSTPKKILMYESQHKVYVGNLPWFTQPDGLRNHFSKFGTIVSTRVLHDRKTGRNRVFAFLSFTSGEERDAALSFNGTQYEGRRIIVREGIEKSES